Recent Publications

Gordon JAR, Tye CE, Banerjee B, Ghule PN, van Wijnen AJ, Kabala FS, Page NA, Falcone MM, Stein JL, Stein GS, Lian JB. LINC01638 sustains human mesenchymal stem cell self-renewal and competency for osteogenic cell fate. Sci Rep. 2023 Nov 20;13(1):20314. doi: 10.1038/s41598-023-46202-z. PMID: 37985890; PMCID: PMC10662126.

Dashti P, Lewallen EA, Gordon JAR, Montecino MA, van Leeuwen JPTM, Stein GS, van der Eerden BCJ, Davie JR, van Wijnen AJ. Protein arginine methyltransferases PRMT1, PRMT4/CARM1 and PRMT5 have distinct functions in control of osteoblast differentiation. Bone Rep. 2023 Jul 25;19:101704. doi: 10.1016/j.bonr.2023.101704. PMID: 37593409; PMCID: PMC10430181.

Che X, Jin X, Park NR, Kim HJ, Kyung HS, Kim HJ, Lian JB, Stein JL, Stein GS, Choi JY. Cbfβ Is a Novel Modulator against Osteoarthritis by Maintaining Articular Cartilage Homeostasis through TGF-β Signaling. Cells. 2023 Mar 31;12(7):1064. doi: 10.3390/cells12071064. PMID: 37048137; PMCID: PMC10093452

Ghule PN, Boyd JR, Kabala F, Fritz AJ, Bouffard NA, Gao C, Bright K, Macfarlane J, Seward DJ, Pegoraro G, Misteli T, Lian JB, Frietze S, Stein JL, van Wijnen AJ, Stein GS. Spatiotemporal higher-order chromatin landscape of human histone gene clusters at histone locus bodies during the cell cycle in breast cancer progression. Gene. 2023 Apr 23;872:147441. doi: 10.1016/j.gene.2023.147441. Epub ahead of print. PMID: 37094694.

Gordon JAR, Evans MF, Ghule PN, Lee K, Vacek P, Sprague BL, Weaver DL, Stein GS, Stein JL. Identification of molecularly unique tumor-associated mesenchymal stromal cells in breast cancer patients. PLoS One. 2023 Mar 20;18(3):e0282473. doi: 10.1371/journal.pone.0282473. PMID: 36940196; PMCID: PMC10027225. 

Fritz AJ, Ghule PN, Toor R, Dillac L, Perelman J, Boyd J, Lian JB, Gordon JAR, Frietze S, Van Wijnen A, Stein JL, Stein GS. Spatiotemporal Epigenetic Control of the Histone Gene Chromatin Landscape during the Cell Cycle. Crit Rev Eukaryot Gene Expr. 2023;33(3):85-97. doi: 10.1615/CritRevEukaryotGeneExpr.2022046190. PMID: 37017672.

Dashti P, van de Peppel J, Thaler R, Paradise CR, Stein GS, Montecino MA, van Leeuwen JPTM, van der Eerden BJ, Dudakovic A, van Wijnen AJ. The lysine methyltransferases SET and MYND domain containing 2 (Smyd2) and Enhancer of Zeste 2 (Ezh2) co-regulate osteoblast proliferation and mineralization. Gene. 2023 Jan 30;851:146928. doi: 10.1016/j.gene.2022.146928. Epub 2022 Sep 30. PMID: 36191822.

Boyd JR, Gao C, Quinn K, Fritz A, Stein J, Stein G, Glass K, Frietze S. peaksat: an R package for ChIP-seq peak saturation analysis. BMC Genomics. 2023 Jan 25;24(1):43. doi: 10.1186/s12864-023-09109-7. PMID: 36698077; PMCID: PMC9878872.

Messier TL, Boyd JR, Gordon JAR, Tye CE, Page NA, Toor RH, Zaidi SK, Komm BS, Frietze S, Stein JL, Lian JB, Stein GS. Epigenetic and transcriptome responsiveness to ER modulation by tissue selective estrogen complexes in breast epithelial and breast cancer cells. PLoS One. 2022 Jul 21;17(7):e0271725. doi: 10.1371/journal.pone.0271725. PMID: 35862394; PMCID: PMC9302754.

Nachmanson D, Officer A, Mori H, Gordon J, Evans MF, Steward J, Yao H, O'Keefe T, Hasteh F, Stein GS, Jepsen K, Weaver DL, Hirst GL, Sprague BL, Esserman LJ, Borowsky AD, Stein JL, Harismendy O. The breast pre-cancer atlas illustrates the molecular and micro-environmental diversity of ductal carcinoma in situ. NPJ Breast Cancer. 2022 Jan 13;8(1):6. doi: 10.1038/s41523-021-00365-y. PMID: 35027560; PMCID: PMC8758681.

Fertal SA, Zaidi SK, Stein JL, Stein GS, Heath JL. CXCR4 Mediates Enhanced Cell Migration in CALM-AF10 Leukemia. Front Oncol. 2022 Jan 5;11:708915. doi: 10.3389/fonc.2021.708915. PMID: 35070954; PMCID: PMC8767107.